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Blueberry spelt muffins are moist and tender, with juicy berries in every bite. The batter uses whole-grain spelt flour for muffins that rise tall and stay soft. Unlike dense whole wheat muffins, these strike the perfect balance; hearty but still light, with crisp tops, warm cinnamon, and plenty of blueberries.

Spelt blueberry muffin in white liner on blue and white plate.
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Craving more muffins? My Banana Blueberry Muffins combine two classics in one tender, fruity bake.

Here’s Why This Spelt Muffin Recipe Works

Nutty but light: Whole wheat spelt flour adds a toasty, nutty flavor and tender structure without the dense, heavy texture you sometimes get from whole wheat muffins.

Moist crumb: Greek yogurt keeps the batter creamy and the muffins soft and rich, locking in moisture without butter or oil overload.

Sugar balance: A mix of brown sugar and granulated sugar adds caramel notes, tenderness, lift, and those golden muffin tops.

Bakery-style rise: Starting at a high oven temperature gives a quick spring for tall, domed muffin tops, then reducing the heat ensures the centers bake through without drying out.

Muffin tray with 11 blueberry muffins, one tilted, and an empty slot.

Want something lighter? My Low Fat Blueberry Muffins are soft, fruity, and lower in fat without losing flavor.

Recipe Tips

Mix with a light hand: Gently fold the batter just until the flour disappears. Overmixing develops gluten and makes the crumb dense.

Use frozen berries straight: No need to thaw the berries. Add frozen blueberries directly to the batter to keep them intact and avoid purple streaks.

Scoop evenly: A large cookie scoop or ¼-cup measure gives uniform muffins so they rise evenly and bake at the same rate.

Rest in the pan: Let muffins cool in the muffin tin for a few minutes before removing. This keeps them from tearing while they’re still delicate.

Cool completely before storing: Warm muffins trap steam, which leads to condensation and soggy texture. Let them cool fully on a wire rack first.

Blueberry muffin, halved muffin, coffee cup, and muffin tin on white surface.

Whole Wheat Spelt Blueberry Muffins

Blueberry spelt muffins strike the sweet spot between hearty and tender. They have whole-grain flavor, juicy blueberries, a hint of cinnamon, and soft crumb all in one bite. Enjoy them fresh from the oven with coffee or tea, or for quick breakfasts and snacks through the week. For another cozy muffin recipe, try my Banana Chocolate Einkorn Muffins.

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Spelt blueberry muffin in white liner on blue and white plate.
Prep Time: 10 minutes
Cook Time: 22 minutes
Total Time: 32 minutes
4.67 from 9 votes

Blueberry Spelt Muffins

Tender, moist whole wheat spelt muffins bursting with juicy blueberries. You can use fresh or frozen blueberries with this recipe.

If you make this recipe, please leave a star rating and comment.

Servings: 18 muffins
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Ingredients 

  • ½ cup granulated sugar, 100 grams
  • ½ cup brown sugar, 100 grams
  • cup vegetable oil, 145 grams
  • 2 large eggs
  • 1 cup plain Greek yogurt, 240 grams
  • 1 ½ teaspoons vanilla extract
  • 2 ¼ cups whole wheat spelt flour, 150 grams
  • 2 teaspoons baking powder
  • 1 teaspoon baking soda
  • 1 teaspoon ground cinnamon
  • ¾ teaspoon salt
  • 2 cups fresh or frozen blueberries

Instructions 

  • Preheat the oven to 425°F. Line 18 muffin tins with cupcake liners or spray the tins with nonstick spray.
  • In a medium bowl, whisk the sugar, brown sugar, oil, eggs, yogurt, and vanilla.
  • In a separate bowl, whisk the spelt flour, baking powder, baking soda, cinnamon, and salt.
  • Gently fold the dry ingredients into the wet ingredients.
  • Fold the blueberries into the batter.
  • Fill the muffin tins and place in the oven at 425°F for 5 minutes.
  • After 5 minutes, turn the oven down to 350°F and bake for another 17 to 20 minutes.
  • Let the muffins cool in the tins for 10 minutes then remove them and let them cool completely on a wire rack.

Video

Notes

Don’t overmix: Stir the batter just until the flour disappears. 
Frozen berries work: No need to thaw the berries. Fold frozen blueberries in straight from the freezer to avoid purple streaks.
Even scooping: A large cookie scoop or ¼-cup measure gives evenly sized muffins that bake at the same rate.
Oven trick for tall tops: Start at 425°F for 5 minutes, then lower to 350°F to finish baking. This quick heat burst helps the muffins rise high with domed tops.
Storage: Cool completely before storing. Keep in an airtight container at room temperature for 2–3 days, or freeze for up to 2 months.

Nutrition

Serving: 1 serving, Calories: 308kcal, Carbohydrates: 49g, Protein: 10g, Fat: 10g, Saturated Fat: 1g, Polyunsaturated Fat: 8g, Cholesterol: 21mg, Sodium: 228mg, Fiber: 7g, Sugar: 13g

Nutrition information is automatically calculated, so should only be used as an approximation.

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Broken spelt muffin on white liner, juicy blueberries inside.

About Dahn Boquist

Dahn Boquist is a retired nurse turned recipe developer, home cook, and baker with years of hands-on experience creating and testing from-scratch recipes. She specializes in whole-food cooking with creative twists on classic dishes. When she’s not in the kitchen, she enjoys sharing meals with family, exploring the Pacific Northwest, and spending time with her grandchildren.

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4.67 from 9 votes (9 ratings without comment)

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14 Comments

  1. Carrie says:

    These look delicious! Could the yogurt be swapped with a dairy free milk somehow?

    1. Dahn Boquist says:

      Yes, but you will get much better results if you use a dairy free yogurt or dairy free sour cream. The reason for that is because the culture in the yogurt or sour cream will enhance the leavening as well as make a more tender muffin. Also, because they are thicker than dairy free milk, the batter will be thicker and that will help the muffins rise more.

  2. Hannah says:

    SO DELICIOUS THANK YOU!
    I used 0% fat fage yogurt so the batter was a little thick but it still turned out amazing!

    1. Dahn Boquist says:

      That’s wonderful! I’m so glad you enjoyed them. Thank you for sharing your experience with us.

  3. Karl says:

    What would happen if I halved the sugar content or no sugar? Other than sweetness, anything.

    1. Dahn Boquist says:

      unfortunately, reducing the sugar or using alternative sugars will have a dramatic impact on the texture and moisture of the muffins. You can use coconut sugar without compromising the integrity of the recipe and you can reduce the amount of sugar by a few tablespoons.Otherwise, the muffins will turn out hard, dense, tough, and dry if you cut the sugar in half. Honey, sometimes works well in baked goods, however I haven’t tested this recipe with honey, so I don’t know the quantity.

  4. LuLu says:

    I used coconut oil and coconut sugar turned out great ? also put it all in a round cake pan ?

    1. Dahn Boquist says:

      that sounds great, thanks for the comment

  5. Julia Ovington says:

    Is there anyway to cut down the volume of added sugar, or replace it with maple syrup or applesauce?

    1. Dahn Boquist says:

      You can but it will change the texture of the muffins. You could replace all of the sugar with coconut sugar if you want a less refined sugar but maple syrup wouldn’t work without some additional changes to the recipe (which I have not tested yet)

  6. angiesrecipes says:

    These muffins look wholesome, Dahn. I would love a few for my breakfast please 🙂

    1. Dahn Boquist says:

      I will save a few for you Angie 😉

  7. John / Kitchen Riffs says:

    You DO use a lot of spelt flour, don’t you? 🙂 And it’s so good, why not? And perfect paired with blueberries in these muffins, I’ll bet. These look terrific — thanks.

    1. Dahn Boquist says:

      So true, I use spelt quite a bit. It’s great in these muffins. Thanks for the comment, John